Job Description P0A0B9 Confidence 99.77% Date Tue Jul 17 17:05:05 BST 2012 Rank 49 Aligned Residues 226 % Identity 15% Template c2i5bC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphomethylpyrimidine kinase; PDBTitle: the crystal structure of an adp complex of bacillus2 subtilis pyridoxal kinase provides evidence for the3 parralel emergence of enzyme activity during evolution Resolution 2.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		D	V	N	R	V	Q	E	V	S	K	T	A	G	G	K	G	L	N	V	T	.	R	V	L	A	Q	V	G	E	P	V	L	A	S	G	F	I	G	G	E	L	G	Q	F	I	A	K	K	L	D	H	A	D	I	K	H	A	F	Y	N	I	K	G	E	T	R	N	C	I	A	I	L	H	E	G	Q	Q	T	E	I
Query Conservation																						.
Alig confidence																						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	A	L	T	I	A	G	S	D	S	S	G	G	A	G	I	Q	A	D	L	K	T	F	Q	E	K	N	V	Y	G	M	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	V	A	M	D	P	N	N	S	W	N	H
Template Known Secondary structure												T	T	S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																																.	40	.	.	.	.	.	.	.	.	.	50	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	G	P	E	I	D	N	Q	E	A	A	G	F	I	K	H	F	E	Q	L	L	E	K	V	E	A	V	A	I	S	G	S	L	P	K	G	L	N	Q	D	Y	Y	A	Q	I	I	E	R	C	Q	N	K	G	V	P	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	C	S	G	A	T	L
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																.												.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																.												.	.	.	.
Template Sequence		Q	V	F	P	.	.	I	D	T	D	T	I	R	A	Q	L	A	T	I	T	D	.	G	I	G	V	D	A	M	K	T	G	M	.	.	.	.	L	P	T	V	D	I	I	E	L	A	A	K	T	I	K	E	K	Q	L	K	N	V	V	I	D	P	V	M	V	C	K	G	A	N	E	V	L	Y	P	E	H	A	Q
Template Known Secondary structure						.	.															T	.	T	S			S							.	.	.	.			S														T	T		S	S								S	S	B		S	S	S	B	S
Template Predicted Secondary structure						.	.																.												.	.	.	.
Template SS confidence
		53	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		Q	T	V	L	E	N	P	Y	K	P	T	V	I	K	P	N	I	S	E	L	Y	Q	L	L	N	Q	P	L	D	E	S	L	E	S	L	K	Q	A	V	S	Q	P	L	F	E	G	I	E	W	I	I	V	S	L	G	A	Q	G	A	.	.	.	.	.	.	F	A	K	H	N	H	T	F	Y	R	V	N	I	P	T
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	R	E	Q	L	A	P	L	A	T	V	I	T	P	N	L	F	E	A	S	Q	L	S	G	M	D	E	L	K	T	V	D	D	M	I	E	A	A	K	K	I	H	A	L	G	A	Q	Y	V	V	I	T	G	G	G	K	L	K	H	E	K	A	V	D	V	L	Y	D	G	E	T	A	E	V	L	E	S	E	M
Template Known Secondary structure							T	G	G	G		S					B									T						S													T	T	T		S							G	G	G	S		S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	L	N	P	V	G	S	G	D	S	T	V	A	G	I	T	S	A	I	L	N	H	E	N	D	H	D	L	L	K	K	A	N	T	L	G	M	L	N	A	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	T	P	Y	T	H	G	A	G	C	T	F	S	A	A	V	T	A	E	L	A	K	G	A	E	V	K	E	A	I	Y	A	A	K	E	F	I	T	A	A	I	K	E
Template Known Secondary structure					S			B	T															T	T																				T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions