Job Description P60639 Confidence 1.25% Date Tue Jul 17 17:05:12 BST 2012 Rank 94 Aligned Residues 162 % Identity 15% Template c4dblB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:vitamin b12 import system permease protein btuc; PDBTitle: crystal structure of e159q mutant of btucdf Resolution 3.49 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		K	R	L	Q	Q	K	Y	P	N	P	F	L	N	P	A	L	I	A	S	L	G	I	I	F	V	L	L	I	F	G	.	.	.	I	S	Y	N	G	Y	M	K	G	G	S	W	I	N	H	I	L	N	A	T	V	V	C	L	A	Y	P	L	Y	K	N	R	E	K	I	K	D	N	V	S	I	I	F	A	S	V	L
Query Conservation																																.	.	.
Alig confidence																																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	S	L	S	V	L	M	L	L	A	L	L	L	S	L	S	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L
Template Known Secondary structure																													T		T	T	S				G	G	G	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		T	G	V	M	L	N	F	M	L	V	F	L	T	L	K	A	F	G	Y	.	.	S	K	D	V	I	V	T	L	L	P	R	S	I	T	A	A	V	G	I	E	V	S	H	E	L	G	G	T	D	T	M	T	V	L	F	I	I	T	T	G	L	I	G	S	I	L	G	S	M	L	L	R	F	G	R	F	E	S	S
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		V	G	A	A	L	A	I	S	G	A	V	M	Q	A	L	F	E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	S	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L
Template Known Secondary structure																	T	T		T	T			T	T	T	T	T																	T	T		S																									T	T				S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	K	G	L	T	Y	G	N	A	S	H	A	F	G	T	A	K	A	L	E	M	D	I	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	G	V	A	L	G	I	I	S	S	A	L	M	T	W	A	I	Y	F	S	T	S	V	D
Template Known Secondary structure																					T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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