Job Description P60639 Confidence 5.84% Date Tue Jul 17 17:05:12 BST 2012 Rank 13 Aligned Residues 83 % Identity 16% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																											.	.																								.	.	.	.	.	.	.	.
Query SS confidence																											.	.																								.	.	.	.	.	.	.	.
Query Sequence		A	L	L	M	I	L	L	T	V	V	L	Y	Y	F	A	K	R	L	Q	Q	K	Y	P	N	P	.	.	F	L	N	P	A	L	I	A	S	L	G	I	I	F	V	L	L	I	F	G	I	S	Y	.	.	.	.	.	.	.	.	N	G	Y	M	K	G	G	S	W	I	N	H	I	L	N	A	T	V	V	C	L	A
Query Conservation																											.	.																								.	.	.	.	.	.	.	.
Alig confidence																											.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F
Template Known Secondary structure																					S	S	S		S																								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	L	Y	K	N	R	E	K	I	K	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	L	Y	R	R	L	A	N	F	L	K	R
Template Known Secondary structure							T	T					T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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