Job Description P60639 Confidence 1.24% Date Tue Jul 17 17:05:12 BST 2012 Rank 95 Aligned Residues 46 % Identity 13% Template c2vakF_ PDB info PDB header:viral protein Chain: F: PDB Molecule:sigma a; PDBTitle: crystal structure of the avian reovirus inner capsid2 protein sigmaa Resolution 2.34 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		G	S	W	I	N	H	I	L	N	A	T	V	V	C	L	A	Y	P	L	Y	K	N	.	.	.	.	.	.	.	R	E	K	I	K	D	N	V	S	I	I	F	A	S	V	L	T	G	V	M	L	N	F	M
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	W	F	M	S	Q	Y	G	N	N	F	V	D	M	C	A	R	L	T	Q	S	C	S	N	M	P	V	E	P	D	G	N	Y	D	Q	Q	M	R	A	L	I	S	L	W	L	L	S	Y	I	G	V	V
Template Known Secondary structure								T	T	T		B												T	S	S					T	T	S																		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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