Job Description P0A0B7 Confidence 99.87% Date Tue Jul 17 17:05:04 BST 2012 Rank 71 Aligned Residues 147 % Identity 19% Template c2k6vA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		L	I	N	K	E	I	L	P	F	T	A	Q	A	F	D	P	K	K	D	Q	F	K	E	V	T	Q	E	D	L	K	G	S	W	S	V	V	C	F	Y	P	A	D	F	S	F	V	C	P	T	E	L	E	D	L	Q	N	Q	Y	E	E	L	Q	K	L	.	.	.	G	V	N	V	F	S	V	S	T	D	T	H	F
Query Conservation																																																																		.	.	.
Alig confidence																		.	.	.	.	.	.																																											.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		L	L	N	P	K	P	V	D	F	A	L	E	G	P	Q	G	.	.	.	.	.	.	P	V	R	L	S	Q	F	Q	D	K	V	V	L	L	F	F	G	F	T	R	C	P	D	V	C	P	T	T	L	L	A	L	K	R	A	Y	E	K	L	P	P	K	A	Q	E	R	V	Q	V	I	F	V	S	V	D	P	E	R
Template Known Secondary structure															S	S	S	.	.	.	.	.	.				G	G	G	S	T	T	S									T	T		S	S														T	T	S						T	T								S		T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		V	H	K	A	W	H	D	H	S	D	A	I	S	K	I	T	Y	T	M	I	G	.	.	.	D	P	S	Q	T	I	T	R	N	F	D	V	L	D	E	A	T	G	.	.	.	.	.	.	.	.	L	A	Q	R	G	T	F	I	I	D	P	D	G	V	V	Q	A	S	E	I	N	A	D	G	I	G	R	D	A	S
Query Conservation																							.	.	.																			.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																			.	.	.	.	.	.	.	.																										.	.
Template Conservation																																																																													.	.
Template Sequence		D	P	P	E	V	A	D	R	Y	A	K	A	F	H	P	S	F	L	G	L	S	G	S	P	E	A	V	R	E	A	A	Q	T	F	G	V	F	Y	Q	K	S	Q	Y	R	G	P	G	E	Y	L	V	D	H	T	A	T	T	F	V	V	K	E	G	R	L	V	L	L	Y	S	P	D	K	A	E	.	.	A	T	D
Template Known Secondary structure																T	T																			T											T	T															T	T												T	.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.
		149	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	H	K	I	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	A	D	L	Q	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions