Job Description P0A0B7 Confidence 97.53% Date Tue Jul 17 17:05:04 BST 2012 Rank 166 Aligned Residues 86 % Identity 16% Template c2j23A_ PDB info PDB header:immune protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: cross-reactivity and crystal structure of malassezia2 sympodialis thioredoxin (mala s 13), a member of a new pan-3 allergen family Resolution 1.41 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	S	W	S	V	V	C	F	Y	P	A	D	F	S	F	V	C	P	T	E	L	E	D	L	Q	N	Q	Y	E	E	L	Q	K	L	G	V	N	V	F	S	V	S	T	D	T	H	F	V	H	K	A	W	H	D	H	S	D	A	I	S	K	I	T	Y	T	M	I	G	D	P	S	Q	T	I	T	R	N	F	D
Query Conservation
Alig confidence																.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	K	V	V	V	I	D	F	W	A	T	W	C	.	G	P	C	K	M	I	G	P	V	F	E	K	I	S	D	T	P	A	G	D	K	V	G	F	Y	K	V	D	V	D	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	I	A	Q	E	V	G
Template Known Secondary structure		S	S	S									T	T		.	S	T													T	S	T					S							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																										.	.	.	.	.	.	.	70
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	E	A	T	G	L	A	Q	R	G	T	F	I	I	D	P	D	G	V	V	Q	A	S	E	I	N	A	D	G	I	G	R	D	A	S	T	L	A	H	K	I	K
Query Conservation
Alig confidence			.	.	.	.	.	.										.													.	.	.	.	.
Template Conservation			.	.	.	.	.	.										.													.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	R	A	M	P	T	F	V	F	F	.	K	N	G	Q	K	I	D	T	V	V	G	A	.	.	.	.	.	D	P	S	K	L	Q	A	A	I	T
Template Known Secondary structure			.	.	.	.	.	.		S	S	S						.		T	T								S	S	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.										.													.	.	.	.	.
Template SS confidence
		71							.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions