 |
| Job Description | P60647 | | Confidence | 3.46% | Date | Tue Jul 17 17:05:12 BST 2012 |
| Rank | 23 | Aligned Residues | 35 |
| % Identity | 14% | Template | c2yevB_ |
| PDB info |
PDB header:electron transport | Chain: B: PDB Molecule:cytochrome c oxidase subunit 2; |
PDBTitle: structure of caa3-type cytochrome oxidase
|
| Resolution | 2.36 Å |
|
|   |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | F | A | V | I | I | I | G | T | C | I | V | A | L | S | S | G | Y | I | A | E | K | M | S | V | K | H | K | H | R | K | G | V | D | A |
| Query Conservation |   |
|
|   |   |
|   |
|
|
|   |
|   |
|   |
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
F | P | W | V | Y | F | F | S | F | L | I | F | L | V | V | A | G | S | L | A | Y | V | T | W | K | F | R | A | R | P | E | D | Q | E | E |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|