Job Description P0A0Q0 Confidence 97.29% Date Tue Jul 17 17:05:07 BST 2012 Rank 81 Aligned Residues 128 % Identity 17% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.																						.
Query SS confidence																														.	.	.	.	.																						.
Query Sequence		N	K	H	E	R	L	D	E	I	A	K	L	V	N	K	K	G	T	I	R	T	N	E	I	V	E	G	L	.	.	.	.	.	N	V	S	D	M	T	V	R	R	D	L	I	E	L	E	N	K	G	I	L	T	.	K	I	H	G	G	A	R	S	N	S	T	F	Q	Y	K	E	I	S	H	K	E	K	H	T	R
Query Conservation																														.	.	.	.	.																						.
Alig confidence																														.	.	.	.	.															.	.	.					.
Template Conservation																																																	.	.	.
Template Sequence		N	R	A	G	R	Q	A	R	I	V	A	I	L	S	S	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	G	I	E	V	T	Q	A	T	L	S	R	D	L	E	E	L	.	.	.	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V	S	G	G
Template Known Secondary structure																T					S											T	T														T	T	.	.	.	T							T	T	S	S										S						T	T	T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	A	E	K	R	F	I	A	K	K	A	A	S	L	I	E	D	G	D	T	L	F	F	G	P	G	T	T	V	E	L	L	A	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	H	T	L	T	I	I	T	N	C	L	P	V	Y	K	I	L	L	E
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	R	M	A	R	L	L	G	E	L	L	V	S	T	D	D	S	G	N	L	A	V	L	R	T	P	P	G	A	A	H	Y	L	A	S	A	I	D	R	A	A	L	P	Q	V	V	G	T	I	A	G	D	D	T	I	L	V	V	A	R	E	P	T	T	G	A	Q	L	A	G
Template Known Secondary structure																				T	T							S	T	T	T											T	T		T	T								S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions