Job Description P0A0Q0 Confidence 96.50% Date Tue Jul 17 17:05:07 BST 2012 Rank 150 Aligned Residues 158 % Identity 20% Template c3eh7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: the structure of a putative 4-hydroxybutyrate coa-transferase from2 porphyromonas gingivalis w83 Resolution 2.05 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.
Predicted Secondary structure																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	E	K	R	F	I	A	K	K	A	A	S	L	I	E	D	G	D	T	L	F	F	G	P	G	T	T	V	E	L	L	A	E	E	V	N	H	.	H	T	L	T	I	I	T	N	C	L	.	P	V	Y	K	I	L	L	E	K	Q	T	A	H	.	.	.	.	.	.	.	.	.	.	.	F	R	V	Y	L	I
Query Conservation																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	V	E	E	A	I	G	R	N	C	A	E	L	I	E	D	G	A	T	L	Q	L	G	I	G	A	I	P	D	A	A	L	L	F	L	K	D	K	K	D	L	G	I	H	T	E	X	F	S	D	G	V	V	E	L	V	R	S	G	V	I	T	G	K	K	K	T	L	H	P	G	K	X	V	A	T	F	L	X
Template Known Secondary structure															T			T	T							S	S									T	T	T	T			S	B					S												T	T	S	B			T	T		S	S	S	T	T					S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		144	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.											.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.
Predicted Secondary structure						.	.	.	.	.	.															.	.	.																						.	.	.	.	.	.	.	.	.	.														.
Query SS confidence						.	.	.	.	.	.															.	.	.																						.	.	.	.	.	.	.	.	.	.														.
Query Sequence		G	G	E	M	.	.	.	.	.	.	R	H	I	T	E	A	F	V	G	E	M	A	N	A	.	.	.	M	L	E	K	L	R	F	S	K	M	F	F	S	S	N	A	V	N	K	G	A	.	.	.	.	.	.	.	.	.	.	V	M	T	S	T	L	D	E	A	Y	T	Q	Q	.	L	A	L	S	N	S	I	E
Query Conservation						.	.	.	.	.	.															.	.	.																						.	.	.	.	.	.	.	.	.	.														.
Alig confidence						.	.	.	.	.	.															.	.	.																						.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	S	E	D	V	Y	H	F	I	D	K	N	P	D	V	E	L	Y	P	V	D	Y	V	N	D	P	R	V	I	A	Q	N	D	N	X	V	S	I	N	S	C	I	E	I	D	L	X	G	Q	V	V	S	E	C	I	G	S	K	Q	F	S	G	T	G	G	Q	V	D	Y	V	R	G	A	A	W	S	K	N	G	K
Template Known Secondary structure											T	T		T	T										T						T	T	S	S	S								S				T	T							S	T	T	S			S	B				T											S	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		204	.	.	.	.	.	210	.		.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure										.							.	.	.	.	.	.	.	.	.
Query SS confidence										.							.	.	.	.	.	.	.	.	.
Query Sequence		K	Y	L	L	I	D	H	T	.	K	V	G	K	E	D	.	.	.	.	.	.	.	.	.	F	T	S	F	C	Q	L	N	E	L	T	A	V	V	M	D	Y
Query Conservation										.							.	.	.	.	.	.	.	.	.
Alig confidence										.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	X	A	I	P	S	T	A	K	N	G	T	A	S	R	I	V	P	I	I	A	E	G	A	A	V	T	T	L	R	N	E	V	D	Y	V	V	T	E	Y
Template Known Secondary structure								S			T	T	T	T			S			S	S			T	T							T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions