Job Description P0A0Q0 Confidence 96.95% Date Tue Jul 17 17:05:07 BST 2012 Rank 110 Aligned Residues 154 % Identity 23% Template c3d3uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coa-transferase (abft-2) from2 porphyromonas gingivalis. northeast structural genomics consortium3 target pgr26 Resolution 2.80 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.
Predicted Secondary structure																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	E	K	R	F	I	A	K	K	A	A	S	L	I	E	D	G	D	T	L	F	F	G	P	G	T	T	V	E	L	L	A	E	E	V	N	H	.	H	T	L	T	I	I	T	N	C	L	.	P	V	Y	K	I	L	L	E	K	Q	T	A	H	.	.	.	.	.	.	.	.	.	.	.	F	R	V	Y	L	I
Query Conservation																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.											.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	L	E	L	R	I	G	Q	N	C	A	S	L	I	K	D	G	D	T	L	Q	L	G	I	G	G	I	P	D	A	V	L	R	A	L	E	G	H	K	D	L	G	I	H	T	E	M	F	T	D	G	V	M	R	M	I	R	K	G	I	I	N	G	K	K	K	T	L	H	P	E	K	V	V	T	S	L	I	F
Template Known Secondary structure														T	T			T	T							S	S									T	T	T	T			S	B					S		B											T		B			S	S		S	S	S	T	T	S				S	B	B
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		144	.	.								.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.
Predicted Secondary structure					.	.	.	.	.	.	.															.	.																																				.																	.
Query SS confidence					.	.	.	.	.	.	.															.	.																																				.																	.
Query Sequence		G	G	E	.	.	.	.	.	.	.	M	R	H	I	T	E	A	F	V	G	E	M	A	N	.	.	A	M	L	E	K	L	R	F	S	K	M	F	F	S	S	N	A	V	N	K	G	A	V	M	T	S	T	L	D	E	A	Y	T	Q	Q	.	L	A	L	S	N	S	I	E	K	Y	L	L	I	D	H	T	.	K
Query Conservation					.	.	.	.	.	.	.															.	.																																				.																	.
Alig confidence					.	.	.	.	.	.	.															.	.																								.	.	.	.									.																	.
Template Conservation																																																			.	.	.	.
Template Sequence		G	S	K	E	L	Y	D	F	V	N	N	N	P	V	I	E	C	Y	P	V	D	Y	I	N	N	P	D	V	I	G	K	N	D	R	M	V	S	I	N	S	C	L	E	M	D	L	M	G	Q	.	.	.	.	A	G	Q	V	D	F	L	R	G	A	K	R	S	K	G	G	I	S	I	M	A	F	P	S	T	A	K
Template Known Secondary structure											T	T		T	T					B					T								S	S	S								S				T	T	S		.	.	.	.											T	T	S	T	T									S			T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		V	G	K	E	D	F	T	S	F	C	.	.	.	Q	L	N	E	L	T	A	V	V	M	D	Y
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		K	G	T	E	S	R	I	V	P	I	L	K	T	G	R	N	E	V	D	Y	V	V	T	E	Y
Template Known Secondary structure		T	T	T			S			S	S					S	T	T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions