Job Description P0A0Q0 Confidence 98.34% Date Tue Jul 17 17:05:07 BST 2012 Rank 21 Aligned Residues 154 % Identity 15% Template c3cdkD_ PDB info PDB header:transferase Chain: D: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase PDBTitle: crystal structure of the co-expressed succinyl-coa2 transferase a and b complex from bacillus subtilis Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.
Predicted Secondary structure																																								.								.																								.	.	.
Query SS confidence																																								.								.																								.	.	.
Query Sequence		I	A	E	K	R	F	I	A	K	K	A	A	S	L	I	E	D	G	D	T	L	F	F	G	P	G	T	T	V	E	L	L	A	E	E	V	N	H	.	H	T	L	T	I	I	T	.	N	C	L	P	V	Y	K	I	L	L	E	K	Q	T	A	H	F	R	V	Y	L	I	G	.	.	.	G	E	M	R	H	I	T
Query Conservation																																								.								.																								.	.	.
Alig confidence																												.												.								.																								.	.	.
Template Conservation																												.
Template Sequence		K	E	A	R	K	R	M	V	K	R	A	V	Q	E	I	K	D	G	M	N	V	N	L	G	I	G	.	M	P	T	L	V	A	N	E	I	P	D	G	V	H	V	M	L	Q	S	E	N	G	L	L	G	I	G	P	Y	P	L	E	G	T	E	D	A	D	L	I	N	A	G	K	E	T	I	T	E	V	T	G	A
Template Known Secondary structure														T	T			T	T							T	T	.	G	G	G	G	G	G	G	G			T	T								T	T	T										T	T				T	T		B		T	T	S		B
Template Predicted Secondary structure																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.																	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.																	.	.
Query Sequence		E	A	F	V	G	E	M	A	N	A	M	L	E	K	L	R	F	S	K	M	F	F	S	S	N	A	V	N	K	G	A	V	M	T	S	T	L	D	E	A	Y	T	Q	Q	.	.	.	.	.	.	.	.	L	A	L	S	N	S	I	E	K	Y	L	L	I	D	H	T	.	.	K	V	G	K	E	D	F	T	S	F
Query Conservation																																														.	.	.	.	.	.	.	.																	.	.
Alig confidence																																										.	.	.		.	.	.	.	.	.	.	.																	.	.
Template Conservation																																										.	.	.
Template Sequence		S	Y	F	D	S	A	E	S	F	A	M	I	R	G	G	H	I	D	L	A	I	L	G	G	M	E	V	S	E	Q	G	D	L	A	N	W	M	I	P	G	.	.	.	M	V	K	G	M	G	G	A	M	D	L	V	N	G	A	K	R	I	V	V	I	M	E	H	V	N	S	K	V	K	K	T	C	S	L	P	L
Template Known Secondary structure															T	T										S				T	T						S					.	.	.						T	T									S	S							S					B		S	S			S
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	L	N	E	L	T	A	V	V	M	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	Q	K	V	V	H	R	L	I	T	D	L
Template Known Secondary structure		S	B	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions