Job Description P0A0Q0 Confidence 98.26% Date Tue Jul 17 17:05:07 BST 2012 Rank 22 Aligned Residues 155 % Identity 15% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta subunit; PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.														.	.	.	.															.	.	.	.	.
Query SS confidence																																.														.	.	.	.															.	.	.	.	.
Query Sequence		K	E	K	H	T	R	Q	I	A	E	K	R	F	I	A	K	K	A	A	S	L	I	E	D	G	D	T	L	F	F	.	G	P	G	T	T	V	E	L	L	A	E	E	V	.	.	.	.	N	H	H	T	L	T	I	I	T	N	C	L	P	V	.	.	.	.	.	Y	K	I	L	L	E	K	Q	T	A	H	F	R
Query Conservation																																.														.	.	.	.															.	.	.	.	.
Alig confidence																																.														.	.	.	.															.	.	.	.	.										.
Template Conservation																																																																														.
Template Sequence		K	E	F	I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	E	T	R	P	K	W	Q	G	K	I	T	A	K	E	L	A	S	Y	G	I	.	P	V	I
Template Known Secondary structure										T											T	T			T	T							S															T	T											T	T	T	T												T	T		.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	Y	L	I	G	G	E	M	R	H	I	T	E	A	F	V	G	E	M	A	N	A	M	L	E	K	L	R	F	S	K	M	F	F	S	S	N	A	V	N	K	G	A	V	M	T	S	T	L	D	E	A	Y	T	Q	Q	L	A	L	S	N	S	I	E	K	Y	L	L	I	D	H	T	K	V	G	K	E	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	V	D	S	A	A	R	H	Y	M	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	K	V	V	M	G	A	D	S	I	T	V	N	G	A	V	I	N	K	I	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y	K	F	H	P	E	T	M	L
Template Known Secondary structure					G	G	G	T	T	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							S				T	T							T	T											T	T									G	G	G	B		S	S			T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.																.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
																															217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	T	S	F	C	Q	L	N	E	L	T	A	V	V	M	D	Y	E	.	.	D	E	E	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		G	Q	L	V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I	I	P	P	Y	A	A
Template Known Secondary structure		T	T	T			B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions