Return to main results Retrieve Phyre Job Id

Job DescriptionP0A0F8
Confidence100.00%DateTue Jul 17 17:05:05 BST 2012
Rank4Aligned Residues138
% Identity51%Templated2j01p1
SCOP infoRibosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40... ......50.........60........ .70........
Predicted Secondary structure 






































.




















.....




Query SS confidence 






































.
























. . . . .









Query Sequence  ELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSG. GGVRPGFEGGQLPLFRRLPKRGFTN. . . . . INRKEYAIVN
Query Conservation   
    

 
 
 
 


 


 


 


 


  
 
.     





 

 

 

 

  .....        

Alig confidence 






































.
























.....









Template Conservation   
 
  

 
 
 
 


 


 


 


 







      





 

 

 

 

               

Template Sequence  DLRPNPGANKRRKRVGRGPGSGHGKTATRGHKGQKSRSGGLKDPRRFEGGRSTTLMRLPKRGMQGQVPGEIKRPRYQGVN
Template Known Secondary structure 

SSS


SS







S
SSSSS
TT
SS

SSS
SS



SSS

SSS
TT

S




S


SS
S




Template Predicted Secondary structure 


































































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   7980.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 





























Query SS confidence 



































































Query Sequence  LDQLNKFEDGTEVTPALLVESGVVKNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKGGAHEVI
Query Conservation 
  
  
     
    
   


      




 
 
   
 
 
   
  
   

 


 
  
Alig confidence 







..















.












.


























Template Conservation 
  
    ..  
    
   
 

 .   




 
   . 
 
 
   
  
   

 


 
  
Template Sequence  LKDLARFE. . GEVTPELLVRAGLLKK. GYRLKILGEGEAK. PLKVVAHAFSKSALEKLKAAGGEPVLL
Template Known Secondary structure  TTTTTTS
..S


TTTTTTSSS
SS.


SS


.SS



SB

TS






Template Predicted Secondary structure 
..









.








.





Template SS confidence 



































































   85....90.. .......100........ .110.........120. ........130.........140........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions