Job Description P0A0F8 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 6 Aligned Residues 130 % Identity 29% Template c4a1cK_ PDB info PDB header:ribosome Chain: K: PDB Molecule:60s ribosomal protein l27a; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. Resolution 3.52 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		S	R	K	E	R	N	R	V	G	R	G	V	A	T	G	N	G	K	T	S	G	R	G	H	K	G	Q	K	A	R	S	G	G	G	V	R	P	G	F	E	G	G	Q	L	P	L	F	R	R	L	P	K	.	.	.	.	.	.	.	.	R	G	F	T	N	I	N	R	K	.	.	.	.	E	Y	A	I	V	N	L
Query Conservation																																																						.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence													.	.	.	.	.																																					.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		S	H	L	K	K	T	R	K	L	R	G	.	.	.	.	.	H	V	S	H	G	H	G	R	V	G	K	H	R	K	G	G	C	R	G	G	R	G	K	A	G	G	M	H	H	H	R	I	L	M	E	K	W	H	P	G	Y	Y	G	K	L	G	M	R	T	F	H	L	K	K	N	P	L	H	C	P	V	V	N	I
Template Known Secondary structure		G	G	G	S						T	T	.	.	.	.	.	S	S	S	T	T	S		S	S	S		S							T	S	S	T	T	T	T	T	T	T	T	S								S	T	T		S	S			S				S	S				G	G	G							G
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.																.
Query SS confidence																										.	.	.																.
Query Sequence		D	Q	L	N	K	F	E	D	G	T	E	V	T	P	A	L	L	V	E	S	G	V	V	K	.	.	.	N	E	K	S	G	I	K	I	L	G	N	G	S	L	D	.	K	K	L	T	V	K	A	H	K	F	S	A	S	A	A	E	A	I	D	A	K	G	G	A	H	E	V	I
Query Conservation																										.	.	.																.
Alig confidence																										.	.	.																.
Template Conservation
Template Sequence		D	K	L	W	S	L	V	S	D	A	T	R	Q	K	Y	A	E	D	K	K	K	V	P	V	I	D	V	T	K	A	G	F	F	K	V	L	G	K	G	R	L	P	N	Q	P	V	V	V	K	A	K	Y	F	S	K	T	A	E	R	R	I	V	A	V	G	G	A	C	V	L	T
Template Known Secondary structure		G	G					S													S	S						T	G	G	G	T								S				S	S							S													T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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