Job Description P0A0F8 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 9 Aligned Residues 126 % Identity 31% Template c3iz5O_ PDB info PDB header:ribosome Chain: O: PDB Molecule:60s ribosomal protein l27a (l15p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		S	R	K	E	R	N	R	V	G	R	G	V	A	T	G	N	G	K	T	S	G	R	G	H	K	G	Q	K	A	R	S	G	G	G	V	R	P	G	F	E	G	G	Q	L	P	L	F	R	R	L	P	K	.	.	.	.	.	.	.	.	R	G	F	T	N	I	N	R	K	.	.	.	.	E	Y	A	I	V	N	L
Query Conservation																																																						.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence													.	.	.	.	.																		.	.																		.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation													.	.	.	.	.																		.	.
Template Sequence		T	R	F	K	K	N	R	K	K	R	G	.	.	.	.	.	H	V	S	A	G	H	G	R	I	G	K	H	R	K	H	P	G	.	.	G	R	G	N	A	G	G	M	H	H	H	R	I	L	F	D	K	Y	H	P	G	Y	F	G	K	V	G	M	R	Y	F	H	R	L	S	N	R	F	H	C	P	A	V	N	V
Template Known Secondary structure		S	S	S	S	S	S			S	S	S	.	.	.	.	.		S	T	T	T	T	S				S	S		S			S	.	.				S	T	T	T	S									T						T	S	T	T		T	T	S				S	S		T	T	S					G	G
Template Predicted Secondary structure													.	.	.	.	.																		.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																															.										.	.
Query SS confidence																															.										.	.
Query Sequence		D	Q	L	N	K	F	E	D	G	T	E	V	T	P	A	L	L	V	E	S	G	V	V	K	N	E	K	S	G	.	I	K	I	L	G	N	G	S	L	.	.	D	K	K	L	T	V	K	A	H	K	F	S	A	S	A	A	E	A	I	D	A	K	G	G	A	H	E	V	I
Query Conservation																															.										.	.
Alig confidence																		.	.												.										.	.
Template Conservation																		.	.
Template Sequence		E	R	L	W	S	M	V	P	A	E	A	G	A	G	A	G	.	.	K	A	P	V	I	D	V	T	Q	F	G	Y	T	K	V	L	G	K	G	M	L	P	P	E	R	P	I	V	V	K	A	K	L	I	S	K	V	A	E	K	K	I	K	A	A	G	G	A	V	L	L	T
Template Known Secondary structure		G	T	S	T	T		T	T	S	S							.	.		S				S							S								S	T	T		T	T							G	G	G	S	S		S				S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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