Job Description P0A0F8 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 3 Aligned Residues 146 % Identity 47% Template c3bboN_ PDB info PDB header:ribosome Chain: N: PDB Molecule:ribosomal protein l15; PDBTitle: homology model for the spinach chloroplast 50s subunit fitted to 9.4a2 cryo-em map of the 70s chlororibosome Resolution 9.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.				.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																	.						.	.	.
Query SS confidence																																																																	.						.	.	.
Query Sequence		M	K	L	H	E	L	K	P	A	E	G	S	R	K	E	R	N	R	V	G	R	G	V	A	T	G	N	G	K	T	S	G	R	G	H	K	G	Q	K	A	R	S	G	G	G	V	R	P	G	F	E	G	G	Q	L	P	L	F	R	R	L	P	K	.	R	G	F	T	N	.	.	.	I	N	R	K	E	Y	A	I
Query Conservation																																																																	.						.	.	.
Alig confidence																																																																	.						.	.	.
Template Conservation
Template Sequence		F	R	L	D	N	L	G	P	Q	P	G	S	R	K	R	P	K	R	K	G	R	G	I	A	A	G	Q	G	A	S	C	G	F	G	M	R	G	Q	K	S	R	S	G	P	G	I	M	R	G	F	E	G	G	Q	M	P	L	Y	R	R	L	P	K	L	R	G	I	A	G	G	M	H	A	G	L	P	K	Y	V	N
Template Known Secondary structure					S	S	S								S						S	S					S		S	S	S		S	S	S					G	G	G	T	S	S		S	S	T	T			S	S		S	S	T	T	S						S	S						S	S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		77	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure										.	.																				.	.	.	.
Query SS confidence										.	.																				.	.	.	.
Query Sequence		V	N	L	D	Q	L	N	K	.	.	F	E	D	G	T	E	V	T	P	A	L	L	V	E	S	G	V	V	K	.	.	.	.	N	E	K	S	G	I	K	I	L	G	N	G	S	L	D	K	K	L	T	V	K	A	H	K	F	S	A	S	A	A	E	A	I	D	A	K	G	G	A	H	E	V	I
Query Conservation										.	.																				.	.	.	.
Alig confidence										.	.																				.	.	.	.
Template Conservation
Template Sequence		V	N	L	T	D	I	E	N	A	G	F	Q	D	G	E	E	V	S	L	E	T	L	K	A	K	R	V	I	N	P	S	G	R	E	R	K	L	P	L	K	I	L	A	D	G	E	L	S	K	K	L	T	I	K	A	G	A	F	S	T	S	A	K	E	K	L	E	Y	A	G	C	S	L	I	V	L
Template Known Secondary structure		S		S	S			S		S	S	T	T	T	T	T	T	T			S	S			S	S	S		S	S	S	S					S								S	S				S	S					S	S			T	G	G	G	T	T	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions