Job Description P0A0F8 Confidence 100.00% Date Tue Jul 17 17:05:05 BST 2012 Rank 8 Aligned Residues 120 % Identity 27% Template c2zkrl_ PDB info PDB header:ribosomal protein/rna Chain: L: PDB Molecule:rna expansion segment es20; PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map Resolution 8.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		E	R	N	R	V	G	R	G	V	A	T	G	N	G	K	T	S	G	R	G	H	K	G	Q	K	A	R	S	G	G	G	V	R	P	G	F	E	G	G	Q	L	P	L	F	R	R	L	P	K	.	R	G	F	T	N	I	N	R	K	E	Y	A	I	V	N	L	D	Q	L	N	K	F	E	D	G	T	E	V	T	P
Query Conservation																																																			.
Alig confidence										.	.	.	.	.																	.	.	.	.																	.
Template Conservation										.	.	.	.	.																	.	.	.	.
Template Sequence		R	K	T	R	K	L	R	G	.	.	.	.	.	H	V	S	H	G	H	G	R	I	G	K	H	H	P	G	G	.	.	.	.	R	G	N	A	G	G	M	H	H	H	R	I	N	F	D	K	Y	H	S	F	C	P	T	V	N	L	D	K	P	W	T	L	V	S	E	Q	T	R	V	N	A	A	K	N	K	T	G
Template Known Secondary structure							T	T	T	.	.	.	.	.	T	S		S	S			S		S					S		.	.	.	.	S	S	S	T	T	T	T	T	T	T		S	S		T	T	T									T							T	T	T	T	T	S	S		T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.																	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		A	L	L	V	E	S	G	V	V	K	N	E	K	S	G	I	K	I	L	G	N	G	S	L	.	D	K	K	L	T	V	K	A	H	K	F	S	A	S	A	A	E	A	I	D	A	K	G	G	A	H	E	V	I
Query Conservation																										.
Alig confidence						.	.	.																		.
Template Conservation						.	.	.
Template Sequence		V	A	P	I	.	.	.	I	D	V	V	R	S	G	Y	Y	K	V	L	G	K	G	K	L	P	K	Q	P	V	I	V	K	A	K	F	F	S	R	R	A	E	E	K	I	K	S	V	G	G	A	C	V	L	V
Template Known Secondary structure						.	.	.	S	T	T		S	S	S								S				S	S							S													T	T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		97	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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