Job Description P0A011 Confidence 78.43% Date Tue Jul 17 17:05:03 BST 2012 Rank 288 Aligned Residues 144 % Identity 15% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	.	.	.	.	.	.	R	K
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	.	.	.	.	.	.	.	.	.	.	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	.	.	.	.	.	.	.	.	.	.	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A
Template Known Secondary structure									T													.	.	.	.	.	.	.	.	.	.															T								T	T	.	.	.	.	.	.	.	.	.	.	T					S		T	T	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.											.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	.	.	.	A	T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F
Query Conservation																																																							.	.	.
Alig confidence										.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																				.	.	.																								.
Template Conservation										.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																																														.
Template Sequence		L	A	K	A	A	R	M	I	.	.	.	.	.	G	V	D	Q	I	H	T	G	T	A	V	.	.	.	.	.	.	.	.	.	.	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	.
Template Known Secondary structure										.	.	.	.	.	T		S									.	.	.	.	.	.	.	.	.	.	S	S	S																S			T	T										S	S			G	G	G							.
Template Predicted Secondary structure										.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																																														.
Template SS confidence
		298	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.											.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R
Query Conservation
Alig confidence		.	.						.														.	.	.	.	.	.
Template Conservation		.	.						.														.	.	.	.	.	.
Template Sequence		.	.	L	F	G	K	D	.	L	V	I	Q	A	G	G	G	V	M	G	H	P	.	.	.	.	.	.	D	G	P	R	A	G	A	K	A	L	R
Template Known Secondary structure		.	.				S		.											T		T	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.						.														.	.	.	.	.	.
Template SS confidence
				362	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.							380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions