Job Description P0A011 Confidence 76.24% Date Tue Jul 17 17:05:03 BST 2012 Rank 298 Aligned Residues 161 % Identity 16% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	.	.	.	.	.	V	L	T
Query Conservation																																																																										.	.	.	.	.
Alig confidence																					.	.																					.	.	.	.	.	.	.	.	.	.												.	.	.								.	.	.	.	.
Template Conservation																					.	.																					.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	.	.	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	.	.	.	.	.	.	.	.	.	.	L	S	A	V	R	M	L	S	N	Y	T	.	.	.	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S
Template Known Secondary structure		S												G	G	G					.	.								T													.	.	.	.	.	.	.	.	.	.												.	.	.	S	S							T	T	T
Template Predicted Secondary structure																					.	.																					.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	.	.	.	L
Query Conservation																																																																														.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		R	M	E	K	Y	G	I	H	S	.	.	.	.	.	.	.	.	.	K	V	M	T	K	L	Q	R	L	A	.	.	.	.	.	G	L	D	A	V	I	M	P	G	F	G	.	.	.	.	.	.	.	.	.	.	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P
Template Known Secondary structure			S	T	T	S	S				.	.	.	.	.	.	.	.	.											.	.	.	.	.	T		S							S	S	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S														S			T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.										.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.											.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	.	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R
Query Conservation																											.
Alig confidence																					.	.	.				.			.														.	.	.	.	.	.
Template Conservation																					.	.	.							.														.	.	.	.	.	.
Template Sequence		C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	.	.	.	K	V	G	N	V	D	.	F	G	F	V	P	G	R	G	V	F	G	H	P	.	.	.	.	.	.	M	G	P	K	A	G	A	K	S	I	R
Template Known Secondary structure									S	B		T	T	T							.	.	.				S	S		.	S				B	S	S	S	S	S	S		T	.	.	.	.	.	.	T
Template Predicted Secondary structure																					.	.	.							.														.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.							390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions