Return to main results Retrieve Phyre Job Id

Job DescriptionP0A011
Confidence26.75%DateTue Jul 17 17:05:03 BST 2012
Rank478Aligned Residues203
% Identity11%Templated1ur4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YEKTGYDVNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEI. . . . NIQKKAYIERIGSECVAEDIPFFLEVL.
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Template Sequence  LEESGVAFYNESGKKQDI. . . . FKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHY
Template Known Secondary structure  TT


B
TTS
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....TT


S

B
TT

B
STT


TT

S
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   36...40.........50... ......60.........70.........80.........90.........100.........110.
 
   166...170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  . . . . . . . . . . TYDDNIPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFK
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Template Sequence  SDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQV. . . GNETNGGLAGETDWAKMSQLFNAGSQ
Template Known Secondary structure  SSS

SSS




GGGTT

TT

...SSS
SS
BTTB

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   112.......120.........130.........140.........150.........160.. .......170.........180........
 
   236...240........ .250.........260.........270.........280.........290.........300.......
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Query Sequence  DQDAATHLPYIYL. . SAGVSAELFQETLKFAHEAGAKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKN
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Template Sequence  AVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG. . . . . . . TLKNLTSVLTSVADTY
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TTSTTTT


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   189190.........200.........210.........220.........230......... 240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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