Job Description P0A011 Confidence 63.26% Date Tue Jul 17 17:05:03 BST 2012 Rank 356 Aligned Residues 143 % Identity 14% Template d1umya_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	.	.	.	L	D	P	E	Y	G	L	P	A	S	D	A	R	N	K	D	C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F
Query Conservation																					.	.	.
Alig confidence																					.	.	.																											.	.	.
Template Conservation																																																		.	.	.
Template Sequence		K	I	F	H	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	A	L	K	T	S	G	K	P	I	A	A	T	M	C	.	.	.	I	G	P	E	G	D	L	H	G	V	S	P	G	E	C	A	V	R	L	V	K	A	G	A	A	I	V	G	V
Template Known Secondary structure														T	T		S								S														T	T		S								.	.	.			T	T			T	T														T	T		S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.													.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	.	.	.	.	.	.	.	.	.	.	.	.	V	K	P	R	K	V	N	E	A	M	K	L	F
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		N	C	H	F	D	P	S	.	.	.	.	.	.	.	T	S	L	Q	T	I	K	L	M	K	E	G	L	E	A	A	R	L	K	A	Y	L	M	S	Q	P	L	A	Y	H	T	P	D	C	G	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A
Template Known Secondary structure			S	S	S				.	.	.	.	.	.	.															T	T	T											S	B			T	T			S	S	T	G	G	G	S	T	T	T	T	T	S		G	G	G	B
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	P	R	F	N	V	D	V	L
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		Y	.	.	N	L	G	V	R	Y	I
Template Known Secondary structure			.	.			T
Template Predicted Secondary structure			.	.
Template SS confidence
		289			290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions