Return to main results Retrieve Phyre Job Id

Job DescriptionP0A011
Confidence65.95%DateTue Jul 17 17:05:03 BST 2012
Rank345Aligned Residues144
% Identity21%Templated1q45a_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120......... 130.........140.........150...... ...160.........170
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Query Sequence  SAKRLKEQGANAVKFLLY. . . . . . . . . . . . . . . . . . . YDVDDAEEINIQKKAYIERIGSECVAE. . DIPFFLEVLTYDDN
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Template Sequence  SALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIAN. . . . . RCRFLKQVVEGVVSAIGASKVGVRVSPAIDH
Template Known Secondary structure  T
S
TTS
TTT



STTSSS.....
GGG
TT

G
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   171........180.........190.........200.........210.... .....220.........230.........240.....
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  IPDNGSVEFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAATHLPYIYLSA
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Template Sequence  LDATDSDPLSLGLAVVGMLNKLQGVN. GSKLAYLHVTQPREEE. . . . . . . . . . . . . . . . . AKLMKSLRMAYNGT. FMSSG
Template Known Secondary structure  GG


S
TT.SS

S



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S
.S
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   246...250.........260.........270. ........280....... ..290.........300. .....
 
   251........260.........270.........280....
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Query Sequence  GVSAELFQETLKFAHEAGAKFNGVLCGRATWSGA
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Template Sequence  GFNKELGMQAVQ. . . QGDAD. . LVSYGRLFIANP
Template Known Secondary structure  S

...TTS
S..S
T
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   322.......330... ..... .340.........350
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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