Job Description P0A011 Confidence 95.50% Date Tue Jul 17 17:05:03 BST 2012 Rank 113 Aligned Residues 162 % Identity 17% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	.	.	.	.	.	.	K
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	.	.	.	.	.	.	.	.	.	.	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	.	.	.	.	.	.	.	.	.	.	H	A	V	I	D	R	Q	R	N	H	G	I	H	F	R	V
Template Known Secondary structure						T	T	T	T		S											.	.	.	.	.	.	.	.	.	.															T								T	T	.	.	.	.	.	.	.	.	.	.						S		S	S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.											.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.											.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																						.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	K	A	L	R	M	S	.	.	.	.	.	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M
Template Known Secondary structure										.	.	.	.	.			S							S	S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.														S					B	G	G	G	T	B		S
Template Predicted Secondary structure										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.															.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	.	.	.	.	.	.	R	T	T	G	F	K	N	I	D	D	L	N	K	V	L	K	D	T	A
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																			.	.	.						.																			.	.										.	.	.	.	.	.
Template Conservation																			.	.	.						.																			.	.
Template Sequence		P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	.	.	.	I	F	G	D	D	.	A	C	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	.	.	G	A	A	A	N	R	V	A	L	E	A	C	T	Q	A	R	N	E	G	R	D	L	A	R	E	G	G	D	V	I	R	S	A	C
Template Known Secondary structure						S	S			G	G	G							.	.	.				S	S	.	S					S					T	S	T	T					.	.																		T	T
Template Predicted Secondary structure																			.	.	.						.																			.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.			.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions