Job Description P0A011 Confidence 85.65% Date Tue Jul 17 17:05:03 BST 2012 Rank 248 Aligned Residues 165 % Identity 19% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.
Predicted Secondary structure																																																																											.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	.	.	.	.	.	.	K
Query Conservation																																																																											.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	.	.	.	.	.	.	.	.	.	.	.	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	.	.	.	.	.	.	.	.	.	.	N	S	T	Y	S	R	Q	K	N	H	G	M	N	F	R	V
Template Known Secondary structure								T	T		S						G	G	G		.	.	.	.	.	.	.	.	.	.	.														T	T								T	T	.	.	.	.	.	.	.	.	.	.	T					S		T	T	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.												.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.											.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																				.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	P	Y	I	Y
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	C	K	W	M	R	M	A	.	.	.	.	.	G	V	D	H	I	H	A	G	T	V	.	.	.	.	.	.	.	.	.	.	.	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V
Template Known Secondary structure										.	.	.	.	.	T		S							S	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S																	S					B	T	T	T	T	B		S					T	T
Template Predicted Secondary structure										.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.												.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.											.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G	F	K	N	I	D	D	L	N	.	.	.	.	.	.	.	.	.	.	K	V	L	K	D
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.						.														.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.						.														.	.	.	.	.	.
Template Sequence		A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	.	.	.	Y	L	G	E	D	.	V	V	L	Q	F	G	G	G	T	I	G	H	P	.	.	.	.	.	.	D	G	I	Q	A	G	A	T	A	N	R	V	A	L	E	A	M	I	L	A	R	N	E	N	R	D	Y	L	T	E	G	P	E	I	L	R	E
Template Known Secondary structure				S	S			T	T	S							.	.	.				S	S	.						S					T		T	.	.	.	.	.	.	T																						T	T
Template Predicted Secondary structure																	.	.	.						.														.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		318	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	T	S	W	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	T	C	G	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions