Job Description P0A011 Confidence 94.51% Date Tue Jul 17 17:05:03 BST 2012 Rank 138 Aligned Residues 122 % Identity 20% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K
Query Conservation
Alig confidence																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	K	A	K	S	L	G	I	C	A	L	I	V	.	.	.	.	.	P	E	L	S	F	E	.	.	.	.	.	.	.	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	K	E	R	V	K	K	L	V	K
Template Known Secondary structure								T	T							.	.	.	.	.	T	T			G	G	.	.	.	.	.	.	.	G												T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S										T
Template Predicted Secondary structure																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.															.	.	150	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N
Query Conservation
Alig confidence					.	.	.	.													.	.	.	.	.	.	.	.	.																									.																		.	.	.	.					.	.
Template Conservation					.	.	.	.													.	.	.	.	.	.	.	.	.																									.																		.	.	.	.					.	.
Template Sequence		H	A	K	.	.	.	.	G	F	I	Y	L	L	A	S	I	G	I	T	.	.	.	.	.	.	.	.	.	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	.	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	.	.	.	.	K	V	A	D	.	.
Template Known Secondary structure		T			.	.	.	.	S								S		S	S	.	.	.	.	.	.	.	.	.																			T	T			S		.					S	S			S	S							T	.	.	.	.	T	T	S	S	.	.
Template Predicted Secondary structure					.	.	.	.													.	.	.	.	.	.	.	.	.																									.																		.	.	.	.					.	.
Template SS confidence
		160	.	.					.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.
		273	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	C	G	R	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	I	V	G	T	S	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions