Job Description P0A011 Confidence 97.16% Date Tue Jul 17 17:05:03 BST 2012 Rank 55 Aligned Residues 115 % Identity 23% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	Y	K	S	S	M	.	.	.	.	.	.	.	.	.	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	V	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	E	I	E
Template Known Secondary structure												T	T										.	.	.	.	.	.	.	.	.															T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																						.	.	80	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.																	.	.	.
Query SS confidence																																																													.	.																	.	.	.
Query Sequence		L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	.	.	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	.	.	.
Query Conservation																																																													.	.																	.	.	.
Alig confidence					.	.			.									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.							.	.																	.	.	.
Template Conservation					.	.			.									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		Q	V	A	.	.	S	V	.	V	D	V	L	Q	T	P	A	.	F	L	C	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	H	A	C	A	R	S	G	K	P	.	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E
Template Known Secondary structure					.	.	T	T	.		S						G	.	G	G	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S		.							T	T	S		G	G	G
Template Predicted Secondary structure					.	.			.									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		99	100	.			.	.		.	.	.	.	.	.	110	.		.	.	.	.	.	.	.																		.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
					268	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	A	K	F	N	G	V	L	C	G	R	A	T
Query Conservation		.	.	.
Alig confidence		.	.	.				.
Template Conservation								.
Template Sequence		A	G	L	S	E	D	.	R	F	M	A	C	E	R	G	V
Template Known Secondary structure		T	T			S		.
Template Predicted Secondary structure								.
Template SS confidence
		157	.	.	160	.	.		.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions