Job Description P0A011 Confidence 98.16% Date Tue Jul 17 17:05:03 BST 2012 Rank 22 Aligned Residues 152 % Identity 20% Template c3o63B_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thiamine-phosphate pyrophosphorylase; PDBTitle: crystal structure of thiamin phosphate synthase from mycobacterium2 tuberculosis Resolution 2.35 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																							.	.	.	.	.
Predicted Secondary structure																											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	.	.	.	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	T	Y
Query Conservation																											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	A	A	L	A	G	G	V	D	I	I	Q	L	R	D	K	G	S	P	G	E	L	R	F	G	P	L	Q	A	R	D	E	L	A	A	C	E	I	L	A	D	A	A	H	R	Y	G	A	L	F	A	V	N	D	R	A	D	I	A	R	A	A	G	A	D	V	L	H	L	G	Q	R	D	L	P	V	N	V	A
Template Known Secondary structure								T	T		S							T	T									S																			T	T	T							S								T	T		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	.	.	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y
Query Conservation																																									.	.
Alig confidence																											.	.	.	.	.	.									.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		R	Q	I	L	A	P	D	T	L	I	G	R	S	T	H	D	P	D	Q	V	A	A	A	A	A	.	.	.	.	.	.	G	D	A	D	Y	F	C	V	G	P	C	W	P	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	L	V	R	V	A	A	E	L	D	K	P	.
Template Known Secondary structure					S		T	T									S										.	.	.	.	.	.	S	S		S							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					.
Template Predicted Secondary structure																											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																				.	.	150	.	.	.	.	.	.	.	.	.	160	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T
Query Conservation
Alig confidence																			.	.	.	.					.	.													.	.	.	.	.	.	.
Template Conservation																			.	.	.	.					.	.													.	.	.	.	.	.	.
Template Sequence		W	F	A	I	G	G	I	N	A	Q	R	L	P	A	V	L	D	.	.	.	.	A	G	A	R	.	.	R	I	V	V	V	R	A	I	T	S	A	D	.	.	.	.	.	.	.	D	P	R	A	A	A	E	Q	L	R	S	A
Template Known Secondary structure						S	S			T	T	T							.	.	.	.	T	T		S	.	.					S					T		S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																			.	.	.	.					.	.													.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions