Job Description P0A011 Confidence 71.38% Date Tue Jul 17 17:05:03 BST 2012 Rank 325 Aligned Residues 165 % Identity 15% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.														.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.
Template Conservation																									.	.	.	.	.	.																																							.	.	.
Template Sequence		V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	E	K	D	A	D	T	K	F	.	.	.	.	.	.	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	N	D	R	I	D	V	A	M	A	I	G	A	D	G	I	H	V	.	.	.	G	Q	D	D	M	P	I	P	M	I
Template Known Secondary structure							S	S										S	S	S		T	T		.	.	.	.	.	.															T	T							S									T		S					.	.	.		T	T	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.																																							.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.
		180	.	.		.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.
Predicted Secondary structure					.							.	.	.	.	.	.	.											.																																											.	.	.	.	.	.
Query SS confidence					.							.	.	.	.	.	.	.											.																																											.	.	.	.	.	.
Query Sequence		A	K	V	.	K	P	R	K	V	N	.	.	.	.	.	.	.	E	A	M	K	L	F	S	E	P	R	.	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	.	.	.	.	.	.	T	H	L	P
Query Conservation					.							.	.	.	.	.	.	.											.																																											.	.	.	.	.	.
Alig confidence					.							.	.	.	.	.	.	.											.																								.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.
Template Sequence		R	K	L	V	G	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L	S	K	M	G	P	D	M	V	D	Y	I	G	V	G	T	L	F	P	T	L	T	K	K	N	K	K	M	G	.	.	.	.	.	.	.	.	.	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H	W	C	R
Template Known Secondary structure							T	T	S								S	T								T	T		T	T	S										S			S	S								.	.	.	.	.	.	.	.	.														T	T		T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	.	.	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T
Query Conservation																									.	.
Alig confidence						.																			.	.																		.	.	.	.	.	.	.
Template Conservation						.																																						.	.	.	.	.	.	.
Template Sequence		T	V	G	I	.	G	G	L	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I	C	V	V	S	D	I	I	A	S	L	.	.	.	.	.	.	.	D	A	A	K	S	T	K	I	L	R	G	L
Template Known Secondary structure						.	S	S			T	T	T									B		T	T	S			B		S					S	T	T	T	T	T		T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure						.																																						.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions