Job Description P0A011 Confidence 95.30% Date Tue Jul 17 17:05:03 BST 2012 Rank 116 Aligned Residues 111 % Identity 19% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K
Query Conservation
Alig confidence																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	.	.	.	A	D	V	P	T	N	.	.	.	.	.	.	.	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	S	D	E	T	L	R	A	V	A	Q
Template Known Secondary structure									T							.	.	.	.	.	T	T	S		G	G	.	.	.	.	.	.	.	G											T	T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S
Template Predicted Secondary structure																.	.	.	.	.							.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.															.	.	.	160	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	.	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F
Query Conservation																																																													.
Alig confidence					.	.			.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.							.												.	.	.	.					.
Template Conservation					.	.			.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.					.
Template Sequence		L	G	K	.	.	G	Y	.	.	.	T	Y	L	L	S	R	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	.	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	.	.	.	.	A	G	A	A	.
Template Known Secondary structure					.	.	S		.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T				.					S	S			S										.	.	.	.	T	T		S	.
Template Predicted Secondary structure					.	.			.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																			.	.	.	.					.
Template SS confidence
		169	170	.			.	.				.	.	.	.	.	.	180	.	.																				.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.
		272	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	L	C	G	R	A	T
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	A	I	S	G	S	A	V
Template Known Secondary structure		.					S	S
Template Predicted Secondary structure		.
Template SS confidence
			230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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