Job Description P0A011 Confidence 60.60% Date Tue Jul 17 17:05:03 BST 2012 Rank 363 Aligned Residues 170 % Identity 17% Template c3m9yB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of triosephosphate isomerase from methicillin2 resistant staphylococcus aureus at 1.9 angstrom resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D
Query Conservation
Alig confidence																						.	.	.												.	.	.	.																																					.	.			.	.
Template Conservation																						.	.	.												.	.	.	.																																					.	.			.	.
Template Sequence		L	E	I	G	A	Q	N	T	Y	F	E	D	N	G	A	F	T	G	E	T	.	.	.	S	P	V	A	L	A	D	L	G	V	K	.	.	.	.	Y	V	V	I	G	H	S	E	R	R	E	L	F	H	E	T	D	E	E	I	N	K	K	A	H	A	I	F	K	H	G	M	T	P	I	I	.	.	C	V	.	.
Template Known Secondary structure							S				S	S	S	S	S	S		T	T			.	.	.									T			.	.	.	.													S																	T	T						.	.			.	.
Template Predicted Secondary structure																						.	.	.												.	.	.	.																																					.	.			.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.																										.									.	.	.																																		.	.	.	.	.	.	.
Template Conservation		.	.	.																										.									.	.	.
Template Sequence		.	.	.	G	E	T	D	E	E	R	E	S	G	K	A	N	D	V	V	G	E	Q	V	K	K	A	V	A	.	G	L	S	E	D	Q	L	K	.	.	.	S	V	V	I	A	Y	E	P	I	W	A	I	G	T	G	K	S	S	T	S	E	D	A	N	E	M	C	A	F	V	R	Q	T	I	A	D	L	S	S	K
Template Known Secondary structure		.	.	.									T	T														T	T	.	T								.	.	.									G	G	G	S	S	S	S																							S
Template Predicted Secondary structure		.	.	.																										.									.	.	.
Template SS confidence
					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
						242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.							.															.	.	.						.	.
Template Conservation												.															.	.	.						.	.
Template Sequence		E	V	S	E	A	T	R	I	Q	Y	.	G	G	S	V	K	P	N	N	I	K	E	Y	M	A	.	.	.	Q	T	D	I	D	.	.	G	A	L	V	G	G	A	S	L	K
Template Known Secondary structure					T	T	S					.		S				T	T	T						T	.	.	.	S	T	T			.	.					S	G	G	G	S	S
Template Predicted Secondary structure												.															.	.	.						.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.			.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions