Job Description P0A011 Confidence 92.60% Date Tue Jul 17 17:05:03 BST 2012 Rank 181 Aligned Residues 130 % Identity 15% Template c3lciA_ PDB info PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w Resolution 2.12 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V
Query Conservation
Alig confidence												.	.	.																																.	.
Template Conservation												.	.	.																																.	.
Template Sequence		R	G	V	M	A	A	L	L	T	P	.	.	.	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	.	.	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V
Template Known Secondary structure			S									.	.	.	B		T	T	S		B															T	T		S					S	S	.	.	G	G	G	T	G	G	G	S																	T	T	T	S
Template Predicted Secondary structure												.	.	.																																.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	.	L
Query Conservation																																																																																.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	.	.	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	.	.	.	.	.	.	.	.	.	.	.	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													.	.			T		S									S	S	.	.	.	.	.	.	.	.	.	.	.																		T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.																.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		244	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions