Job Description P0A011 Confidence 64.12% Date Tue Jul 17 17:05:03 BST 2012 Rank 352 Aligned Residues 157 % Identity 15% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.																										.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.																										.	.	.	.
Query Sequence		S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	D	.	.	.	.	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	.	.	.	.	F	F	L	E	V	L	T	Y	D	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.																										.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A	T	P	E	E	T
Template Known Secondary structure									T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T									S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S
Query Conservation
Alig confidence									.	.	.	.	.	.															.											.	.
Template Conservation									.	.	.	.	.	.															.											.	.
Template Sequence		R	G	S	D	L	G	Y	.	.	.	.	.	.	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	.	V	S	N	I	Q	Y	L	A	I	A	.	.	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	A	S	G
Template Known Secondary structure			T	T					.	.	.	.	.	.															.		S									.	.		T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	S	S						S
Template Predicted Secondary structure									.	.	.	.	.	.															.											.	.
Template SS confidence
		235	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		G	I	N	S	P	E	S	A	L	D	A	L	Q	H	A	.	.	.	.	.	.	.	D	X	V	G	X	S	S	P	F	V	T	E	P
Template Known Secondary structure		S			S								G	G	G		.	.	.	.	.	.	.	S					S	T						T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320								.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions