Job Description P0A011 Confidence 95.60% Date Tue Jul 17 17:05:03 BST 2012 Rank 110 Aligned Residues 145 % Identity 18% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	.	.	.	D	I	P	F	F	L	E	V	L	T	Y	D	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.																.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I	E	N	.	.	.	.	.	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y
Template Known Secondary structure										T		S								T	T	S								T	T	T					S	T	T	S	S	S				.	.	.	.	.		T													T	S		T	T	S											S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.
Template Sequence		M	E	G	G	I	N	I	.	.	.	.	.	.	.	.	D	M	M	V	E	Y	I	N	M	I	.	.	.	K	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	.	.	.	.	.	.	.	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A	E	T	I	K	K	R	C	N	I	K	T	S	A	V	G
Template Known Secondary structure		S	T	T	S				.	.	.	.	.	.	.	.											.	.	.	T	T	T		S									S	S		.	.	.	.	.	.	.							T	T	T	T												T							S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.											.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A
Query Conservation
Alig confidence															.	.	.						.	.
Template Conservation															.	.	.						.	.
Template Sequence		L	I	T	T	Q	E	L	A	E	E	I	L	S	.	.	.	N	E	R	A	D	.	.	L	V	A	L	G	R	E	L	L	R	N	P
Template Known Secondary structure		S													.	.	.	T	T	S		S	.	.					S							T
Template Predicted Secondary structure															.	.	.						.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions