Job Description P0A011 Confidence 97.48% Date Tue Jul 17 17:05:03 BST 2012 Rank 46 Aligned Residues 201 % Identity 15% Template c3jr2D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:hexulose-6-phosphate synthase sgbh; PDBTitle: x-ray crystal structure of the mg-bound 3-keto-l-gulonate-6-phosphate2 decarboxylase from vibrio cholerae o1 biovar el tor str. n16961 Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.
Query Sequence		S	A	L	A	F	D	Q	R	G	A	L	K	R	M	M	A	K	H	Q	T	E	E	P	T	V	A	Q	I	E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	L	D	P	E	Y	G	L	P	.	.	.	.	.	A	S	D	A	R	N	K	D	C	G	L	L	L	A	Y	E	K	T	G	Y
Query Conservation																																																									.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																		.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		I	Q	I	A	L	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	L	T	D	A	V	A	V	A	S	N	.	V	A	S	Y	V	D	V	I	E	V	G	T	I	L	A	F	A	E	G	X	K	A	V	S	T	L	R	H	N	H	P	N	H	I	L	V	C	D	X	K	T	T
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											.		G	G	G		S													T	T											T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		6	.	.	.	10	.	.																			.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		D	G	.	.	.	.	.	.	.	.	.	.	G	A	I	L	S	R	X	A	F	E	A	G	A	D	W	I	T	V	S	A	A	A	H	I	A	.	.	.	.	.	.	.	.	.	.	.	T	I	A	A	C	K	K	V	A	D	E	L	N	G	E	I	Q	I	E	I	Y	G	N	W	T	.	.	.	.	.	.	.
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.												T		S						T	T	S				.	.	.	.	.	.	.	.	.	.	.												T	T									S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		67	.											.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.												.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.									.	.																.	.	.	.	.	.	.	.																									.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.									.	.																.	.	.	.	.	.	.	.																									.											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	X	Q	D	A	K	A	W	V	.	.	D	L	G	I	T	Q	A	I	Y	H	R	S	R	D	A	.	.	.	.	.	.	.	.	E	L	A	G	I	G	W	T	T	D	D	L	D	K	X	R	Q	L	S	A	L	G	I	E	.	L	S	I	T	G	G	I	V	P	E	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.									.	.		T	T													.	.	.	.	.	.	.	.				T			S															T			.					S	S			G	G	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.									.	.																.	.	.	.	.	.	.	.																									.											.
Template SS confidence
													119	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G
Query Conservation
Alig confidence		.	.	.											.	.														.	.	.	.	.	.	.
Template Conservation		.	.	.											.	.														.	.	.	.	.	.	.
Template Sequence		.	.	.	D	I	Y	L	F	E	G	I	K	T	.	.	K	T	F	I	A	G	R	A	L	A	G	A	E	.	.	.	.	.	.	.	G	Q	Q	T	A	A	A	L	R	E	Q	I	D
Template Known Secondary structure		.	.	.	G	G	G	G	G	T	T	S			.	.						S	G	G	G	S	S	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.											.	.														.	.	.	.	.	.	.
Template SS confidence
					176	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions