Job Description P0A011 Confidence 94.49% Date Tue Jul 17 17:05:03 BST 2012 Rank 139 Aligned Residues 132 % Identity 18% Template c3h5dD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L
Query Conservation
Alig confidence														.	.	.																																.	.
Template Conservation														.	.	.																																.	.
Template Sequence		K	E	C	K	I	I	T	A	F	I	T	P	.	.	.	F	H	E	D	G	S	I	N	F	D	A	I	P	A	L	I	E	H	L	L	A	H	H	T	D	G	I	L	L	A	G	.	.	T	T	A	E	S	P	T	L	T	H	D	E	E	L	E	L	F	A	A	V	Q	K	V	V	N	G	R	V	P	L	I	A
Template Known Secondary structure		T	T											.	.	.	B		T	T	S	S	B		T	T												T	T							S	S	.	.	T	T	T	T	G	G	G	S																S	S	S	S	S
Template Predicted Secondary structure														.	.	.																																.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	.	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T
Query Conservation																																								.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.				.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	T	R	D	S	I	E	F	V	K	E	V	A	.	.	E	F	G	G	F	A	A	G	L	A	I	V	P	Y	Y	N	.	.	.	.	.	.	.	.	.	.	.	K	P	S	Q	E	G	M	Y	Q	H	F	K	A	I	A	D	A	S
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													.	.						S									S	S	.	.	.	.	.	.	.	.	.	.	.																	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.																.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		242	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	P	Y	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	I	I	I
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions