Job Description P0A011 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 4 Aligned Residues 236 % Identity 17% Template c3gndC_ PDB info PDB header:lyase Chain: C: PDB Molecule:aldolase lsrf; PDBTitle: crystal structure of e. coli lsrf in complex with ribulose-5-phosphate Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	K	S	N	Q	K	I	A	S	I	E	Q	L	S	N	N	.	E	G	I	I	S	A	L	A	F	D	Q	R	G	A	L	K	R	M	M	A	K	H	Q	T	E	E	P	T	V	A	Q	I	E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	L	D	P	E	Y	G	L	P	A	S	D	A
Query Conservation																		.
Alig confidence																		.																.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		A	L	D	W	G	M	Q	S	R	L	S	R	I	F	N	P	K	T	G	K	T	V	M	L	A	F	D	H	G	Y	F	Q	.	.	.	.	.	.	.	.	.	.	.	G	P	T	T	G	L	E	R	I	D	I	N	I	A	P	L	F	E	.	H	A	D	V	L	M	C	T	R	G	I	L	R	S	V	V	P	P
Template Known Secondary structure		T	S												S		T	T	T										T					.	.	.	.	.	.	.	.	.	.	.	S	S		T	T		T	T					T	G	G	G	G	G	.	G		S													S		G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	K	D	C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F
Query Conservation
Alig confidence				.												.	.	.																																									.	.	.	.
Template Conservation				.												.	.	.																																									.	.	.	.
Template Sequence		A	T	.	N	R	P	V	V	L	R	A	S	G	A	.	.	.	N	S	I	L	A	E	L	S	N	E	A	V	A	L	S	M	D	D	A	V	R	L	N	S	C	A	V	A	A	Q	V	Y	I	G	S	E	Y	E	H	Q	.	.	.	.	S	I	K	N	I	I	Q	L	V	D	A	G	M	K	V	G	M	P	T
Template Known Secondary structure		G	G	.											S	.	.	.			T	T	S		T	T						S								T	T		S								T	T	S	T	T				.	.	.	.																T
Template Predicted Secondary structure				.												.	.	.																																									.	.	.	.
Template SS confidence
		99	100		.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	V	T	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	D	Q	R	Y	F	S	L	A	T	R	I	A	A	.	.	E	M	G	A	Q	I	I	K	T	Y	Y	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	F	E	R	I	V	A	G
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.			T		S								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.															.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.																						.	.	.	.	.	210	.	.	.
		241	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	H	L	P	Y	I	Y	L	S	A	G	.	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T
Query Conservation													.
Alig confidence													.																			.	.														.	.	.	.	.	.	.
Template Conservation																																.	.														.	.	.	.	.	.	.
Template Sequence		C	P	V	P	I	V	I	A	G	G	K	K	L	P	E	R	E	A	L	E	M	C	W	Q	A	I	D	Q	G	A	.	.	S	G	V	D	M	G	R	N	I	F	Q	S	D	.	.	.	.	.	.	.	H	P	V	A	M	M	K	A	V	Q	A	V
Template Known Secondary structure			S	S								S																	T	T		.	.						S					T	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.														.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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