Job Description P0A011 Confidence 100.00% Date Tue Jul 17 17:05:03 BST 2012 Rank 6 Aligned Residues 259 % Identity 16% Template c3fokH_ PDB info PDB header:structural genomics, unknown function Chain: H: PDB Molecule:uncharacterized protein cgl0159; PDBTitle: crystal structure of cgl0159 from corynebacterium2 glutamicum (brevibacterium flavum). northeast structural3 genomics target cgr115 Resolution 2.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	S	I	E	Q	L	S	N	N	E	G	I	I	S	A	L	A	F	D	Q	R	G	A	L	K	R	M	M	A	K	H	Q	T	E	E	P	T	V	A	Q	I	E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	L	D	P	E	Y	G	L	P	A	S	D	A	R	N	K	D	C	G
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		K	Q	R	R	K	R	E	L	L	G	E	D	G	K	L	F	I	V	A	A	D	H	.	.	P	A	R	G	A	L	A	V	G	D	N	E	T	A	X	A	N	R	Y	E	L	L	E	R	X	A	I	A	L	S	R	P	G	V	D	G	V	L	G	T	P	D	I	I	D	D	L	A	A	L	G	L	L	D	D	K
Template Known Secondary structure			T	S					S	S		T	T										S	.	.	G	G	G	T				S	S	S	S	S	S	S	S	S															S	T	T																	T	T			T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	.
Query Conservation																																																																																	.
Alig confidence																																																						.	.																										.
Template Conservation																																																						.	.
Template Sequence		I	V	V	G	S	X	N	R	G	G	L	R	G	A	S	F	E	X	D	D	R	Y	T	G	Y	N	V	S	S	X	V	D	R	G	V	D	F	A	K	T	L	V	R	I	N	L	S	D	A	G	T	A	.	.	P	T	L	E	A	T	A	H	A	V	N	E	A	A	A	A	Q	L	P	I	X	L	E	P	F	X
Template Known Secondary structure											S		T	T		T	T	T	T	S					S										T												T	T		T	T			.	.																T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y
Query Conservation
Alig confidence													.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	W	V	N	G	K	V	V	N	D	.	.	.	.	.	L	S	T	D	A	V	I	Q	S	V	A	I	A	A	.	.	G	L	G	N	D	S	S	Y	T	W	X	K	L	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	X	E	R	V	X	E	S	T	T	X	P	T
Template Known Secondary structure						T	T						.	.	.	.	.		S													.	.	T		S	S			S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					G	G	G		S	S
Template Predicted Secondary structure													.	.	.	.	.															.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		246	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure								.																																.	.
Query SS confidence								.																																.	.
Query Sequence		I	Y	L	S	A	G	.	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	.	.	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T
Query Conservation								.																																.	.
Alig confidence								.																			.	.												.	.			.	.	.	.	.	.	.
Template Conservation																											.	.																.	.	.	.	.	.	.
Template Sequence		L	L	L	G	G	E	G	G	P	D	A	T	F	A	S	W	E	H	A	L	T	L	P	G	V	.	.	R	G	L	T	V	G	R	T	L	L	Y	P	Q	D	G	.	.	.	.	.	.	.	D	V	A	A	A	V	D	T	A	A	R	L
Template Known Secondary structure							S														T	T	S	T	T		.	.							T	T	T	S	S		S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.																.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280								.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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