Job Description P0A011 Confidence 97.87% Date Tue Jul 17 17:05:03 BST 2012 Rank 29 Aligned Residues 200 % Identity 13% Template c3exsB_ PDB info PDB header:lyase Chain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		I	S	A	L	A	F	D	Q	R	G	A	L	K	R	M	M	A	K	H	Q	T	E	E	P	T	V	A	Q	I	E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	L	D	P	E	Y	G	L	P	A	.	.	.	.	.	S	D	A	R	N	K	D	C	G	L	L	L	A	Y	E	K	T	G
Query Conservation																																																											.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																		.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		N	L	Q	V	A	L	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	L	K	G	A	I	T	A	A	V	S	V	.	G	N	E	V	D	V	I	E	A	G	T	V	C	L	L	Q	V	G	S	E	L	V	E	V	L	R	S	L	F	P	D	K	I	I	V	A	D	T	K	C
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												.	G	G	G		S														T											S	S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		7	.	.	10	.	.	.	.																			.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	.	.	.	.	.	.	.	.	.	.	G	G	T	V	A	K	N	N	A	V	R	G	A	D	W	M	T	C	I	C	S	A	T	I	.	.	.	.	.	.	.	.	P	T	M	K	A	A	R	K	A	I	E	D	I	N	P	D	K	G	E	I	Q	V	E	L	Y	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.	.										T	T	T		S						T	T	S			.	.	.	.	.	.	.	.															T	T	T									S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70											.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	.	.	H	L	P	Y	I	Y	L	S	A	G	V	S
Query Conservation																																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.				.
Template Conservation		.	.	.	.	.	.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	D	W	T	Y	D	Q	A	Q	Q	W	L	.	.	D	A	G	I	S	Q	A	I	Y	H	Q	S	R	T	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	D	L	N	K	V	K	K	L	I	E	M	G	F	R	.	V	S	V	T	G	G	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S											.	.		T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T			.					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
											121	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G	F	K	N	I
Query Conservation
Alig confidence					.	.	.	.										.	.														.	.	.	.	.	.	.
Template Conservation					.	.	.	.										.	.														.	.	.	.	.	.	.
Template Sequence		V	D	T	.	.	.	.	L	K	L	F	E	G	V	D	V	.	.	F	T	F	I	A	G	R	G	I	T	E	A	K	.	.	.	.	.	.	.	N	P	A	G	A	A	R	A	F	K	D	E	I	K	R	I	W
Template Known Secondary structure		T	T	T	.	.	.	.	G	G	G	G	T	T	S			.	.	S										S	S	S	.	.	.	.	.	.	.	S
Template Predicted Secondary structure					.	.	.	.										.	.														.	.	.	.	.	.	.
Template SS confidence
		179	180	.					.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions