Job Description P0A011 Confidence 96.41% Date Tue Jul 17 17:05:03 BST 2012 Rank 86 Aligned Residues 175 % Identity 13% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	E	Q	L	K	V	L	V	A	E	E	L	T	Q	Y	A	S	S	I	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	Y	G	L	P	A	S	D	A	R	N	K	D	C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.					.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.					.	.	.	.
Template Sequence		D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	E	D	.	.	.	.	.	.	A	A	D	Q	.	.	.	.	S
Template Known Secondary structure																T	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S				.	.	.	.	.	.					.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.					.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.							.	.	.	90					.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		K	R	L	K	E	Q	G	A	N	A	V	K	F	L	.	.	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M
Query Conservation																.	.
Alig confidence																.	.											.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	.	.	.	.	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	.	.	.	.	.	.	.	.	.	V	E	L	V	G	R	L	K
Template Known Secondary structure							T	T		S									S	S		S						.	.	.	.														T	T														S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F
Query Conservation
Alig confidence							.	.	.							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.														.	.
Template Conservation							.	.	.							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.														.	.
Template Sequence		A	A	F	P	G	.	.	.	I	V	T	G	V	K	.	D	S	S	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	H	T	E	R	L	L	K	E	H	G	D	.	L	A	I	L	I	G	.	.	.	.	.	.	D	E	R	D	L	A	R	G	V	R	L	G	G	.	.
Template Known Secondary structure					T	T	.	.	.	T						.			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	.	S						.	.	.	.	.	.											T	T		.	.
Template Predicted Secondary structure							.	.	.							.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.							.	.	.	.	.	.														.	.
Template SS confidence
		159	160	.	.	.				.	.	.	.	.	.		170	.	.	.	.																				.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.
		272	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	L	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	A	I	S	G
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions