Job Description P0A011 Confidence 34.89% Date Tue Jul 17 17:05:03 BST 2012 Rank 447 Aligned Residues 114 % Identity 11% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	.	.	.	.	.	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.										.	.	.	.	.	.	.																			.	.
Template Conservation																																.	.	.	.	.	.	.																			.	.
Template Sequence		V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	A	.	.	.	.	.	.	.	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A	V	.	.	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A	S	L
Template Known Secondary structure									T		S						S	S		T	T			S								.	.	.	.	.	.	.												T	T						.	.					T	T			T	T		S	S	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.																			.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y
Query Conservation
Alig confidence										.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	D	L	E	K	A	A	.	.	L	L	G	V	E	Y	V	V	V	H	P	G	S	G	R	P	.	.	.	.	.	.	.	.	.	.	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V
Template Known Secondary structure										.	.			T										B	S			.	.	.	.	.	.	.	.	.	.															T			S	S	S
Template Predicted Secondary structure										.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.											.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions