Job Description P0A011 Confidence 95.09% Date Tue Jul 17 17:05:03 BST 2012 Rank 124 Aligned Residues 156 % Identity 16% Template c2zrvC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:isopentenyl-diphosphate delta-isomerase; PDBTitle: crystal structure of sulfolobus shibatae isopentenyl diphosphate2 isomerase in complex with reduced fmn. Resolution 2.30 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	.	.	.	.	.	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																						.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	I	Q	M	I	E	A	D	A	I	A	V	H	L	N	P	A	Q	E	V	F	Q	P	E	G	E	P	E	Y	Q	I	Y	A	L	E	K	L	R	D	I	S	K	E	.	.	.	L	S	V	P	I	I	V	K	E	S	G	N	G	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M
Template Known Secondary structure							T	T		S														S	S	S							T													.	.	.		S	S							S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200																		.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																													.	.	240
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	A	K	L	L	Y	.	.	S	Y	G	I	K	N	F	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	G	G	T	N	W	I	A	I	E	M	I	R	D	I	R	R	G	N	W	K	A	E	S	A	K	N	F	L	D	W	G	V	P	T	A	A	S	I	M	E	V	R	Y	S	V
Template Known Secondary structure									.	.		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	S	B													T	T		T								T	T	T		S		B												S
Template Predicted Secondary structure									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.															.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.							.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	.	.	.	.	.	.	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G	F	K	N	I	D	D	L
Query Conservation																																											.	.	.	.	.	.
Alig confidence																					.	.	.	.							.	.											.	.	.	.	.	.
Template Conservation																					.	.	.	.							.	.
Template Sequence		P	D	S	F	L	V	G	S	G	G	I	R	S	G	L	D	A	A	K	.	.	.	.	A	I	A	L	G	A	.	.	D	I	A	G	M	A	L	P	V	L	K	S	A	I	E	G	K	E	S	L	E	Q	F	F	R	K	I	I	F	E	L	K	A	A	M	M	L	T	G	S	K	D	V	D	A	L
Template Known Secondary structure		T	T							S	S			S							.	.	.	.					T		.	.	S																																					T	T			B
Template Predicted Secondary structure																					.	.	.	.							.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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