Job Description P0A011 Confidence 52.91% Date Tue Jul 17 17:05:03 BST 2012 Rank 382 Aligned Residues 146 % Identity 21% Template c2pcqA_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8 Resolution 2.10 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	.	.	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A
Query Conservation																		.	.
Alig confidence																		.	.										.	.	.	.											.	.	.	.	.							.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.											.	.	.	.	.							.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	E	A	K	A	A	G	A	X	A	L	L	A	T	P	P	R	Y	Y	H	G	S	L	G	A	G	.	.	.	.	L	L	R	Y	Y	E	A	L	A	E	.	.	.	.	.	K	X	P	L	F	L	.	.	Y	H	V	P	Q	N	T	K	V	D	L	P	.	.	.	.	.	.	.	.	.	.	.	L	E	A
Template Known Secondary structure									T		S									T	T	G	G	G	T	T	T		.	.	.	.											.	.	.	.	.		S					.	.													.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.											.	.	.	.	.							.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.												.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K
Query Conservation
Alig confidence							.	.			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.											.
Template Conservation							.	.			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.											.
Template Sequence		V	E	A	L	A	.	.	P	H	.	P	N	V	L	G	I	K	D	S	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	R	I	A	F	Y	Q	A	R	L	Q	.	E	F	R	V	Y	T	G	H	A	P	.	.	.	.	.	.	T	F	L	G	A	L	A	L	G	A	.
Template Known Secondary structure						T	.	.	T	S	.	T	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	.	S								G	G	.	.	.	.	.	.	G							T	T		.
Template Predicted Secondary structure							.	.			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.	.	.											.
Template SS confidence
		139	140	.	.	.			.	.		.	.	.	.	150	.	.	.	.	.	.	.																			.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G	F	K	N	I	D	D	L	N	K	V	L	K	D
Query Conservation
Alig confidence		.															.	.	.	.	.	.	.
Template Conservation		.															.	.	.	.	.	.	.
Template Sequence		.	E	G	G	I	L	A	A	A	N	L	A	P	R	A	.	.	.	.	.	.	.	Y	R	A	L	L	D	H	F	R	E	G	R	L	A	E	A	Q	E	L	Q	K	K	L	F	P
Template Known Secondary structure		.						G	G	G	G	T					.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.															.	.	.	.	.	.	.
Template SS confidence
			190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions