Return to main results Retrieve Phyre Job Id

Job DescriptionP0A011
Confidence86.56%DateTue Jul 17 17:05:03 BST 2012
Rank238Aligned Residues118
% Identity13%Templatec2nuxB_
PDB info PDB header:lyaseChain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170.......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VNAKGRLPDCLVEWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSV
Query Conservation            
   


 
 
 








    
   
    
   
  
 
 
   


 
 
 
 
          
Alig confidence 

































.....





























...........
Template Conservation 
  

 

       
  

  

 

   



.....
   

 


  
           
 

  ...........
Template Sequence  FDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTG. . . . . LGPALSKDEKRQNLNALYDVTHKLIFQVGS. . . . . . . . . . .
Template Known Secondary structure  B
TTS
B
TT

TSTTT.....TGGGS
TTT
S



...........
Template Predicted Secondary structure 
















.....








...........
Template SS confidence 















































































   11........20.........30.........40.... .....50.........60.........70....
 
   178.180.........190.........200.........210.........220.........230.........240.......
Predicted Secondary structure 





























Query SS confidence 





































































Query Sequence  EFAKVKPRKVNEAMKLFSEPRFNVDVLKVEVPVNMKYVEGFAEGEVVYTKEEAAQHFKDQDAATHLPYIY
Query Conservation        
  
  
 
     





 
   
                                  
 

Alig confidence  ....













..















..........























Template Conservation  .... 
    
 

  
 ..  


 
 
  
 
  ..........      
      

 
   

 
Template Sequence  . . . . LNLNDVMELVKFSN. . EMDILGVSSHSPYYFP. . . . . . . . . . RLPEKFLAKYYEEIARISSHSLYI
Template Known Secondary structure  ....S
T..TS

S


S

..........S



S
Template Predicted Secondary structure  ....

..









..........






Template SS confidence 





































































   75....80........ .90.........100.... .....110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions