Job Description P0A011 Confidence 84.99% Date Tue Jul 17 17:05:03 BST 2012 Rank 250 Aligned Residues 128 % Identity 16% Template c2hmcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens Resolution 1.90 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	L	L	L	A	Y	E	K	T	G	Y	D	V	N	A	K	G	R	L	P	D	C	L	V	E	W	S	A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V
Query Conservation
Alig confidence												.	.	.																																			.	.	.	.	.
Template Conservation												.	.	.																																			.	.	.	.	.
Template Sequence		S	G	V	I	P	A	L	X	T	P	.	.	.	C	R	Q	D	R	T	P	D	F	D	A	L	V	R	K	G	K	E	L	I	A	D	G	X	S	A	V	V	Y	C	G	S	X	G	.	.	.	.	.	D	W	P	L	L	T	D	E	Q	R	X	E	G	V	E	R	L	V	K	A	G	I	P	V	I	V	G	T
Template Known Secondary structure		S					B					.	.	.	B		T	T	S	S	B															T	T							S	S	G	G	G	.	.	.	.	.	T	G	G	G	S															T	T
Template Predicted Secondary structure												.	.	.																																			.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	.	A	T	H	L
Query Conservation																																																																													.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	T	A	S	A	V	A	H	A	V	H	A	Q	.	.	K	V	G	A	K	G	L	X	V	I	P	R	V	L	S	R	.	.	.	.	.	.	.	.	.	.	G	S	V	I	A	A	Q	K	A	H	F	K	A	I	L	S	A	A	P	E	I
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													.	.			T		S									S	S	S	.	.	.	.	.	.	.	.	.	.	T	T																S	T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		244	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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