Job Description P0A011 Confidence 72.28% Date Tue Jul 17 17:05:03 BST 2012 Rank 320 Aligned Residues 84 % Identity 14% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																										.	.	.	.
Template Conservation																																								.	.	.	.																										.	.	.	.
Template Sequence		L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	Q	T	D	L	L	Q	I	D	P	N	F	G	.	.	.	.	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I	R	V	I	L	D	L	T	P	.	.	.	.	N	Y	R	G	E	N	S	W	F
Template Known Secondary structure							T	T	T														T	T		S	T	T								T	T	T		.	.	.	.															T	T									T	.	.	.	.	T	T	T	S	S	S	T	T	S
Template Predicted Secondary structure																																								.	.	.	.																										.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		A	K	V	K	P	R	K	.	.	.	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V
Query Conservation									.	.	.
Alig confidence									.	.	.										.	.
Template Conservation																					.	.
Template Sequence		S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	.	.	Q	A	G	V	D	G	F	Q	V
Template Known Secondary structure		S	S			T															.	.		T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions