Job Description P0A011 Confidence 97.04% Date Tue Jul 17 17:05:03 BST 2012 Rank 61 Aligned Residues 121 % Identity 21% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	L	Y	Y	D	V	D	D	A	E	E	.	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M
Query Conservation																											.
Alig confidence																			.								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	.	K	P	R	T	S	P	Y	S	F	Q	G	L	G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V	T	E	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	H	V
Template Known Secondary structure									T		S					B	S	S	.				S	S	T	T	S					T															T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																			.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																						.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	L	P	Y	I	Y	L	S	A	G	V	.	.	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A
Query Conservation																																																															.	.
Alig confidence						.	.			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.								.	.
Template Conservation						.	.			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		E	T	V	S	.	.	R	Y	.	A	D	M	L	Q	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	N	M	Q	N	F	P	L	L	R	E	V	G	R	S	G	K	P	.	V	L	L	K	R	G	F	G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N
Template Known Secondary structure						.	.			.		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T															.							T	T																T	T
Template Predicted Secondary structure						.	.			.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		116	.	.	.			120	.		.	.	.	.	.	.	.																			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	N	G	V	L	C	G	R
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		W	.	Q	V	V	L	V	E	R
Template Known Secondary structure			.
Template Predicted Secondary structure			.
Template SS confidence
		174		.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions