Job Description P0A011 Confidence 91.77% Date Tue Jul 17 17:05:03 BST 2012 Rank 196 Aligned Residues 176 % Identity 14% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		113	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.											.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure										.	.									.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.									.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	.	.	A	N	A	V	K	F	L	L	.	.	.	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	.	.	.	.	.	.	.	.	.	.	A	E	D	I	P	F	F	L	E	V	L	T	Y	D	D	N	I	P	D	N	G	S	V
Query Conservation										.	.									.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.									.	.	.																											.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250
Predicted Secondary structure																																																				.	.	.	.	.																.	.
Query SS confidence																																																				.	.	.	.	.																.	.
Query Sequence		E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S	E	P	R	F	N	V	D	V	L	K	V	E	V	P	V	N	M	K	Y	V	E	G	F	A	E	G	E	V	V	Y	T	K	.	.	.	.	.	E	E	A	A	Q	H	F	K	D	Q	D	A	A	T	H	.	.	L	P	Y	I	Y	L	S	A
Query Conservation																																																				.	.	.	.	.																.	.
Alig confidence		.	.	.																.	.																															.	.	.	.	.																.	.
Template Conservation		.	.	.																.	.
Template Sequence		.	.	.	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	.	.	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G
Template Known Secondary structure		.	.	.																.	.		T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S						S	S
Template Predicted Secondary structure		.	.	.																.	.
Template SS confidence
					433	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	S	A	E	L	F	Q	E	T	L	K	F	A	H	E	A	G	A	K	F	N	G	V	L	C	G	R	A	T	W	S	G	A	V	Q	V	Y	I	E	Q	G	E	D	A	A	R	E	W	L	R	T	T	G	F	K	N	I	D	D	L
Query Conservation
Alig confidence														.	.	.	.				.	.																					.
Template Conservation														.	.	.	.				.	.																					.
Template Sequence		I	F	S	G	L	D	A	L	E	K	I	E	.	.	.	.	A	G	A	.	.	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	.	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y	N	L	K	E	A
Template Known Secondary structure				S										.	.	.	.	T	T		.	.						S							G	G	G						.												T		S	S	S	G	G	G
Template Predicted Secondary structure														.	.	.	.				.	.																					.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.					520	.	.			.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions