Job Description P0A011 Confidence 79.17% Date Tue Jul 17 17:05:03 BST 2012 Rank 285 Aligned Residues 87 % Identity 28% Template c1bf2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:isoamylase; PDBTitle: structure of pseudomonas isoamylase Resolution 2.00 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	R	L	K	E	Q	G	A	N	A	V	K	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	Y	D	V	D	D	A	E	E	I	N	I	Q	K	K	A	Y	I	E	R	I	G	S	E	C	V	A	E	D	I
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																																													.	.	.
Template Sequence		A	S	Y	L	A	S	L	G	V	T	A	V	E	F	L	P	V	Q	E	T	Q	N	D	A	N	D	V	V	P	N	S	D	A	N	Q	N	Y	W	G	Y	M	T	E	N	Y	F	S	P	D	R	R	Y	A	Y	N	K	A	A	G	.	.	.	G	P	T	A	E	F	Q	A	M	V	Q	A	F	H	N	A	G	I
Template Known Secondary structure									T							S			B		B	S		T	T	T	T	S	S	T	T			T	T				S				B	S		S	S		B		G	G	G		S			S	T	T	.	.	.																T	T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.																																												.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	F	L	E	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	D	N	I	P	D	N	G	S	V	E	F	A	K	V	K	P	R	K	V	N	E	A	M	K	L	F	S
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		K	V	Y	M	D	V	V	Y	N	H	T	A	E	G	G	T	W	T	S	S	D	P	T	T	A	T	I	Y	S	W	R	G	L	D	N	A	T	Y	Y	E	L	T	S	G	N	Q	Y	F	Y	D	N	T	G	I	G	A	N	F	N	T	Y	N	T	V	A	Q	.	.	.	N	L	I	V	D	S	L	A	Y	W	A
Template Known Secondary structure										S	S		T	T		S	B	S	S	S	S		S	S		B	B		S	S										B		B		T	T	S	S	S	B			S	S	S	S	S			B		T	T	S					.	.	.
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	R	F	N	V	D	V	L	K	V
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		N	.	T	M	G	V	D	G	F	R	F
Template Known Secondary structure			.	T	S
Template Predicted Secondary structure			.
Template SS confidence
		365		.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions