Job Description P48940 Confidence 2.08% Date Tue Jul 17 17:05:10 BST 2012 Rank 85 Aligned Residues 62 % Identity 10% Template d1w4ma_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain Resolution UNK

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	V	F	E	E	A	I	N	N	I	M	P	V	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P	E	R	R	T	T	L	G	L	R	W	L	V	N	Y	A	R	L	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.									.
Template Conservation																																					.	.	.	.	.	.									.
Template Sequence		L	G	A	L	Y	L	S	M	K	D	T	E	K	G	I	K	E	L	N	L	E	K	D	K	K	I	F	N	H	C	F	T	G	N	C	.	.	.	.	.	.	V	I	D	W	L	V	S	N	.	Q	S	V	R	N	R	Q	E	G	L	M	I	A	S	S	L	L	N	E
Template Known Secondary structure										T	S	S	S	S	S	S								S	S				T	T							.	.	.	.	.	.								T	.	T	S		S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.									.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions