Job Description P48940 Confidence 21.24% Date Tue Jul 17 17:05:10 BST 2012 Rank 15 Aligned Residues 61 % Identity 15% Template d1o7fa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain Resolution 2.5

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	F	E	E	A	I	N	N	I	M	P	V	L	E	V	K	A	R	R	V	G	G	S	N	Y	Q	V	P	V	E	V	R	P	E	R	R	T	T	L	G	L	R	W	L	V	N	Y	A	R	L	R	G	E	K	T	M	E	D	R	L	A	N	E	I	L	D	A
Query Conservation
Alig confidence																.																				.	.	.	.	.	.
Template Conservation																.																				.	.	.	.	.	.
Template Sequence		K	I	L	R	I	A	I	L	S	R	A	P	H	M	.	I	R	D	R	K	Y	H	L	K	T	Y	R	Q	C	C	V	G	T	E	.	.	.	.	.	.	L	V	D	W	M	I	Q	Q	T	S	C	V	H	S	R	T	Q	A	V	G	M	W	Q	V	L	L	E	D
Template Known Secondary structure													G	G	G	.	S						S	S												.	.	.	.	.	.								S	S	S			S															T
Template Predicted Secondary structure																.																				.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions